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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Mrpl30, mitochondrial ribosomal protein L30
Sequence ID:NM_027098
Entrez Gene ID:107734
Ensembl ID:ENSMUSG00000026087

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1 B|1

Chromosomal Position (from UCSC)

Chromosomal Position:1: 37890552 - 37898333

NM_027098 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1323794739737947428
331133794978737949867
1141903795078337950859
1912713795217437952254
2724183795453237954678
4196913795490537955177

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3585410Full LengthBC004614mitochondrial ribosomal protein L30

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_027098 NP_081374 Q9D7N6  

Related Sequences

 
mRNAGenPeptSwissProt
BC004614 AAH04614 Q9D7N6
AK009074 BAB26057 Q9D7N6
AK089015 BAC40703 Q9D7N6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Mrpl30 NP_081374 R.norvegicus Mrpl30 301352   NP_001100373 97
H.sapiens MRPL30 51263 Gene Info NP_660213 84

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)