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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Nr1d2, nuclear receptor subfamily 1, group D, member 2
Sequence ID:NM_011584
Entrez Gene ID:353187
Ensembl ID:ENSMUSG00000021775

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:14 A2|14

Chromosomal Position (from UCSC)

Chromosomal Position:14: 18204714 - 18211872

NM_011584 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
128261903656919039394
282730371904043219040642
303832231904429219044477
322438431904738719048006
384439881904916319049307
398940771905248119052569
407843441905450019054766
434546401907132419071619

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5361394Full LengthBC096461nuclear receptor subfamily 1, group D, member 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035714  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011584 NP_035714 Q8C598
Q60674
Hormone_recep
zf-C4

Related Sequences

 
mRNAGenPeptSwissProt
U12142 AAA79513 Q4VAB7
Q60674
U09504 AAC52144 Q60674
BC008556 AAH08556 Q922C3
BC096461 AAH96461 Q4VAB7
Q60674
AK033326 BAC28233 Q8CCE4
AK054522 BAC35811 Q8C6J1
AK079075 BAC37525 Q8C598

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Nr1d2 NP_035714 H.sapiens NR1D2 9975 Gene Info NP_005117 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)