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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Apof, apolipoprotein F
Sequence ID:NM_133997
Entrez Gene ID:103161
Ensembl ID:ENSMUSG00000047631

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10 D3|10 73.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:10: 128268734 - 128270153

NM_133997 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1773127705052127705824
7741930127706050127707206

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4211838Full LengthBC010815apolipoprotein F
5101712Full LengthBC025827apolipoprotein F
5102555Full LengthBC022795apolipoprotein F
5123598Full LengthBC024769apolipoprotein F

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_133997 NP_598758    

Related Sequences

 
mRNAGenPeptSwissProt
BC010815 AAH10815 Q91V80
BC022795 AAH22795 Q91V80
BC024769 AAH24769 Q91V80
BC025827 AAH25827 Q91V80

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Apof NP_598758 R.norvegicus Apof 500761   NP_001019522 78
H.sapiens APOF 319 Gene Info NP_001629 63

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)