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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Slc19a1, Solute carrier family 19 (folate transporter), member 1
Sequence ID:NM_031196
NM_001199271
Entrez Gene ID:20509
Ensembl ID:ENSMUSG00000001436

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10 C1|10 41.3

Chromosomal Position (from UCSC)

Chromosomal Position:10: 77032728 - 77050424

Transcript StartTranscript EndChromosomal Start Chromosomal End
1897649600376496091
903197650109476501323
32010737650456076505313
107412667650552676505718
126714087650750576507646
140922957651228476513170

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4239690Full LengthBC015263solute carrier family 19 (sodium/hydrogen exchanger), member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_112473  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001199271 NP_001186200    
NM_031196 NP_112473 Q542F3
P41438
Folate_carrier

Related Sequences

 
mRNAGenPeptSwissProt
L23755 AAA39738 Q542F3
P41438
L36539 AAB38483 Q542F3
P41438
U32469 AAC52258 Q542F3
P41438
U66103 AAC53287 Q542F3
P41438
BC015263 AAH15263 Q542F3
P41438
AK002560 BAB22188 Q9DCR3
AK050714 BAC34390 Q8BKT9
AK079592 BAC37693 Q542F3
P41438
AK088803 BAC40582 Q542F3
P41438

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Slc19a1 NP_112473 R.norvegicus Slc19a1 29723   NP_058995 90
H.sapiens SLC19A1 6573 Gene Info NP_919231 69

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)