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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Lxn, latexin
Sequence ID:NM_016753
Entrez Gene ID:17035
Ensembl ID:ENSMUSG00000047557

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3 E1|3 31.6 cM

Chromosomal Position (from UCSC)

Chromosomal Position:3: 67457998 - 67463907

NM_016753 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13296726192067262248
3303926726251567262577
3935296726484367264979
5307076726523367265410
7087706726628067266342
77110926726750767267828

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40101205Full LengthBC115521latexin
40101207Full LengthBC115522latexin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_058033  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_016753 NP_058033 P70202 Latexin

Related Sequences

 
mRNAGenPeptSwissProt
BC115521 AAI15522 Q14BZ3
BC115522 AAI15523 Q14BZ3
P70202
D88769 BAA13700 P70202
AK032170 BAC27739 P70202
AK149981 BAE29211 P70202

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lxn NP_058033 R.norvegicus Lxn 59073   NP_113843 93
H.sapiens LXN 56925 Gene Info NP_064554 85

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)