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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Syt12, synaptotagmin XII
Sequence ID:NM_134164
Entrez Gene ID:171180
Ensembl ID:ENSMUSG00000049303

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19 A|19

Chromosomal Position (from UCSC)

Chromosomal Position:19: 4447686 - 4467940

NM_134164 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1195344459074447859
1954208744509284451061
2088220844522764452396
2209242444537644453979
2425281744564944456886
2818301144606164460809
3012306844679064467962
3069327744769344477142

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40126165Full LengthBC116846synaptotagmin XII
40126167Full LengthBC116848synaptotagmin XII

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_598925  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_134164 NP_598925 Q920N7 C2

Related Sequences

 
mRNAGenPeptSwissProt
BC116846 AAI16847 Q14AG7
BC116848 AAI16849 Q920N7
Q14AG7
AB062804 BAB69674 Q920N7
AK046627 BAC32812 Q920N7
AK083139 BAC38779 Q920N7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Syt12 NP_598925 R.norvegicus Syt12 191595   NP_620190 99
H.sapiens SYT12 91683 Gene Info NP_001171351 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)