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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cbx5, chromobox 5
Sequence ID:NM_001076789
NM_001110216
NM_007626
Entrez Gene ID:12419
Ensembl ID:ENSMUSG00000009575

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15 F3|15

Chromosomal Position (from UCSC)

Chromosomal Position:15: 103198185 - 103239852

 Exon Info From UCSC:
NM_001076789
NM_001110216
NM_007626

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3499489Full LengthBC004707chromobox homolog 5 (Drosophila HP1a)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031652  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001076789 NP_001070257    
NM_001110216 NP_001103686    
NM_007626 NP_031652 Q61686 Chromo
Chromo_shadow

Related Sequences

 
mRNAGenPeptSwissProt
BC004707 AAH04707 Q61686
AK008792 BAB25897 Q61686
AK018349 BAB31173 Q61686
AK019198 BAB31596 Q61686
AK030366 BAC26923 Q61686
AK030442 BAC26966 Q61686
AK032975 BAC28107 Q61686
X99641 CAA67960 Q61686

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cbx5 NP_031652 R.norvegicus Cbx5 300266   NP_001100267 100
H.sapiens CBX5 23468 Gene Info NP_001120793 98
A.gambiae AgaP_AGAP009444 1269242   XP_307857 52
D.melanogaster Su(var)205 34119   NP_476755 48

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)