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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cck, cholecystokinin
Sequence ID:NM_031161
Entrez Gene ID:12424
Ensembl ID:ENSMUSG00000032532

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9 F4|9 71.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:9: 121489826 - 121495662

NM_031161 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
18394121398942121399318
395610121403434121403649
611702121404715121404806

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
1400830Full LengthBC028487cholecystokinin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_112438  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_031161 NP_112438 P09240 Gastrin

Related Sequences

 
mRNAGenPeptSwissProt
M11739 AAA37382 P09240
BC028487 AAH28487 Q8R041
AK002677 BAB22279 P09240

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cck NP_112438 R.norvegicus Cck 25298   NP_036961 93
H.sapiens CCK 885 Gene Info NP_001167609 81

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)