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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ispd, isoprenoid synthase domain containing
Sequence ID:NM_178629
Entrez Gene ID:75847
Ensembl ID:ENSMUSG00000043153

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12 A3|12

Chromosomal Position (from UCSC)

Chromosomal Position:12: 36382179 - 36688592

NM_178629 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
15063710810537108610
5077833711693237117208
7849333715287537153024
93410383719968837199792
103910843720328637203331
108511793722856437228658
118012693724801937248108
127013623724854537248637
136314943727441537274546
149526903741483537416030

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30610161Full LengthBC096030RIKEN cDNA 4930579E17 gene
30612014Full LengthBC086665RIKEN cDNA 4930579E17 gene
40093984Full LengthBC118038RIKEN cDNA 4930579E17 gene
5067437IncompleteBC024061RIKEN cDNA 4930579E17 gene

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_848744  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_178629 NP_848744 Q5RJG7 IspD

Related Sequences

 
mRNAGenPeptSwissProt
BC024061 AAH24061 Q5RJG7
BC086665 AAH86665 Q5RJG7
BC096030 AAH96030 Q5RJG7
BC118038 AAI18039 Q5RJG7
AK039004 BAC30199 Q5RJG7
AK043122 BAC31463 Q5RJG7
AK045940 BAC32538 Q5RJG7
AK142563 BAE25106 Q3UQD6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ispd NP_848744 R.norvegicus Ispd 493574   NP_001008387 91
H.sapiens ISPD 729920 Gene Info NP_001094896 75

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)