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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Gtf2i, general transcription factor II I
Sequence ID:NM_001080746
NM_001080747
NM_001080748
NM_001080749
NM_010365
Entrez Gene ID:14886
Ensembl ID:ENSMUSG00000060261

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5 G2|5 75.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:5: 134237843 - 134314693

 Exon Info From UCSC:
NM_001080746
NM_001080747
NM_001080748
NM_001080749
NM_010365

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5704935Full LengthBC053044general transcription factor II I

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034495  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001080746 NP_001074215 Q9ESZ8  
NM_001080747 NP_001074216    
NM_001080748 NP_001074217    
NM_001080749 NP_001074218    
NM_010365 NP_034495   GTF2I

Related Sequences

 
mRNAGenPeptSwissProt
AF043219 AAC02990 Q9ESZ8
AF043220 AAC02991 Q9ESZ8
AF017085 AAC53569 Q9ESZ8
BC053044 AAH53044 Q9ESZ8
AY030290 AAK49785 Q9ESZ8
AY030291 AAK49786 Q9ESZ8
AY030292 AAK49787 Q9ESZ8
AY030293 AAK49788 Q9ESZ8
AK006796 BAB24743 Q9ESZ8
AK013348 BAB28803 Q9ESZ8
AK147201 BAE27759 Q3UHU8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Gtf2i NP_034495 R.norvegicus Gtf2i 353256   NP_001001512 98
H.sapiens GTF2I 2969 Gene Info NP_127494 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)