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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Slc19a3, solute carrier family 19, member 3
Sequence ID:NM_030556
Entrez Gene ID:80721
Ensembl ID:ENSMUSG00000038496

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 C5|1 51.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:1: 83013796 - 83038448

NM_030556 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
214678300909883010563
146816098301127783011418
161018028301590683016098
180326108301890883019715
261127658302280083022954
276628958302458783024716
289629748303494483035022

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40047017Full LengthBC109154solute carrier family 19 (sodium/hydrogen exchanger), member 3
40047019Full LengthBC109155solute carrier family 19 (sodium/hydrogen exchanger), member 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_085033  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_030556 NP_085033 Q99PL8 Folate_carrier

Related Sequences

 
mRNAGenPeptSwissProt
AF271634 AAG53880 Q99PL8
BC109154 AAI09155 Q99PL8
BC109155 AAI09156 Q99PL8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Slc19a3 NP_085033 R.norvegicus Slc19a3 316559   NP_001101698 88
D.melanogaster CG17036 34679   NP_609584 38
C.elegans folt-2 178745   NP_503780 35
A.gambiae AgaP_AGAP006349 1276957   XP_316371 34
C.elegans folt-3 4363081   NP_001041097 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)