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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Setd6, SET domain containing 6
Sequence ID:NM_001035123
Entrez Gene ID:66083
Ensembl ID:ENSMUSG00000031671

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8 D1|8

Chromosomal Position (from UCSC)

Chromosomal Position:8: 95715912 - 95719004

NM_001035123 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13589823981298240169
3595009824025298240393
5016959824050698240700
6968169824082098240940
8179979824182098242000
99811409824209298242234
114116699824237598242903

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8862220Full LengthBC139198SET domain containing 6
8862221Full LengthBC139199SET domain containing 6

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001035123 NP_001030295 Q9CWY3  

Related Sequences

 
mRNAGenPeptSwissProt
BC139198 AAI39199 Q9CWY3
BC139199 AAI39200 Q9CWY3
AK010304 BAB26837 Q9CWY3
AK075597 BAC35846 Q9CWY3
AK167753 BAE39788 Q9CWY3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Setd6 NP_001030295 R.norvegicus Setd6 291844   NP_001099637 93
H.sapiens SETD6 79918 Gene Info NP_079136 82
N.crassa NCU09827 3874678   XP_958526 29

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)