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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Otc, ornithine transcarbamylase
Sequence ID:NM_008769
Entrez Gene ID:18416
Ensembl ID:ENSMUSG00000031173

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:X A1|X 3.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:X: 10252358 - 10321024

NM_008769 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
115598294849829638
15629498419219842059
29537698439499844030
37746498537649853851
46561898774409877593
61974198803869880508
74279598858949885947
79694598860369886185
946108398895189889655
1084226598969689898149

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4196455Full LengthBC024893ornithine transcarbamylase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032795  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_008769 NP_032795 Q543H3
P11725
EC 2.1.3.3 OTCace
OTCace_N

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M17030 AAA39865 Q543H3
P11725
EC 2.1.3.3
BC024893 AAH24893 Q8R1A8  
AK050930 BAC34465 Q543H3
P11725
EC 2.1.3.3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Otc NP_032795 R.norvegicus Otc 25611   NP_037210 97
H.sapiens OTC 5009 Gene Info NP_000522 93
N.crassa NCU01667 3873060   XP_956873 52
S.pombe arg3 2543593   NP_593692 48
A.thaliana OTC 843869   NP_177667 45
S.cerevisiae ARG3 853357   NP_012447 42

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)