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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Xirp2, xin actin-binding repeat containing 2
Sequence ID:NM_001024618
NM_001083919
Entrez Gene ID:241431
Ensembl ID:ENSMUSG00000027022

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 C1.3|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 67526260 - 67526611

 Exon Info From UCSC:
NM_001024618
NM_001083919

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9094316IncompleteBC172830cardiomyopathy associated 3
9094317IncompleteBC172831cardiomyopathy associated 3
9094318IncompleteBC172832cardiomyopathy associated 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001019789  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001024618 NP_001019789 Q4U4S6 LIM
Actin_bind_SAA
NM_001083919 NP_001077388    

Related Sequences

 
mRNAGenPeptSwissProt
AY775570 AAV52766 Q4U4S6
AY775571 AAV52767 Q4U4S6
AY775572 AAV52768 Q4U4S6
DQ011666 AAY44537 Q4U4S6
EF122140 ABL63748 Q4U4S6
EF119712 ABO69241 B2BBR6
EF119713 ABO69242 B2BBR7
EF119714 ABO69243 B2BBR8
EF119715 ABO69244 B2BBR9
EF119716 ABO69252 Q4U4S6
EU286528 ABY27565 A9YSG0
EU286529 ABY27566 A9YSG1
EU286530 ABY27567 A9YSG2
EU286531 ABY27568 A9YSG3
AK040786 BAC30703 Q4U4S6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Xirp2 NP_001077388 R.norvegicus Xirp2 311098   NP_973718 88
H.sapiens XIRP2 129446 Gene Info NP_689594 73

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)