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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Pkp4, plakophilin 4
Sequence ID:NM_026361
NM_175464
Entrez Gene ID:227937
Ensembl ID:ENSMUSG00000026991

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2|2 C3

Chromosomal Position (from UCSC)

Chromosomal Position:2: 59354251 - 59355204

 Exon Info From UCSC:
NM_026361
NM_175464

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5705529Full LengthBC079848plakophilin 4
30648695Full LengthBC082578plakophilin 4
3995350IncompleteBC078638plakophilin 4
4193296IncompleteBC055949plakophilin 4
5008935IncompleteBC019128plakophilin 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_080637  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_026361 NP_080637 Q68FH0 Arm
NM_175464 NP_780673    

Related Sequences

 
mRNAGenPeptSwissProt
BC019128 AAH19128 Q05D18
BC078638 AAH78638 Q68FH0
BC079848 AAH79848 Q68FH0
BC082578 AAH82578 Q68FH0
AK021168 BAB32313 Q68FH0
AK077250 BAC36708 Q68FH0
AK078240 BAC37187 Q68FH0
AK146720 BAE27383 Q3UIX3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pkp4 NP_080637 R.norvegicus Pkp4 295625   NP_001099952 100
H.sapiens PKP4 8502 Gene Info NP_003619 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)