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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Serpinc1, serine (or cysteine) peptidase inhibitor, clade C (antithrombin), member 1
Sequence ID:NM_080844
Entrez Gene ID:11905
Ensembl ID:ENSMUSG00000026715

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 H2.1|1 84.6 cM

Chromosomal Position (from UCSC)

Chromosomal Position:1: 160987490 - 161003010

NM_080844 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1110162908736162908845
111253162917571162917713
254623162919509162919878
624839162923526162923741
840977162925448162925585
9781368162927480162927870
13691433162930119162930183
14342159162932417162933142

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5123932Full LengthBC033377serine (or cysteine) peptidase inhibitor, clade C (antithrombin), member 1
5125534Full LengthBC019447serine (or cysteine) peptidase inhibitor, clade C (antithrombin), member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_543120  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_080844 NP_543120 Q543J5
P32261
Serpin

Related Sequences

 
mRNAGenPeptSwissProt
S47225 AAB23965 P32261
BC019447 AAH19447 Q543J5
P32261
BC033377 AAH33377 Q543J5
P32261
AK050295 BAC34171 Q543J5
P32261

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Serpinc1 NP_543120 R.norvegicus Serpinc1 304917   NP_001012027 94
H.sapiens SERPINC1 462 Gene Info NP_000479 88
A.thaliana SRP3 842706   NP_176586 34
A.thaliana AT1G62160 3767608   NP_176407 33
A.thaliana SRP2 815941   NP_179060 31
A.thaliana AT1G64010 842704   NP_176584 31
A.thaliana AT1G62170 842513   NP_176408 30
A.thaliana AT2G35580 818123   NP_181101 29

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta