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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Lphn1, latrophilin 1
Sequence ID:NM_181039
Entrez Gene ID:330814
Ensembl ID:ENSMUSG00000013033

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8 C3|8

Chromosomal Position (from UCSC)

Chromosomal Position:8: 83941579 - 83941946

 Exon Info From UCSC:
NM_181039

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5697420IncompleteBC078414latrophilin 1
6405470IncompleteBC085138latrophilin 1
6411808IncompleteBC055793latrophilin 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_851382  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_181039 NP_851382 Q80TR1 7tm_2
GPS
Gal_Lectin
OLF
Latrophilin
HRM

Related Sequences

 
mRNAGenPeptSwissProt
BC055793 AAH55793 Q80TR1
AY255594 AAO85106 Q80TR1
AK134818 BAE22298 Q3UYB4
AK147519 BAE27967 Q80TR1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lphn1 NP_851382 R.norvegicus Lphn1 65096   NP_075251 100
H.sapiens LPHN1 22859 Gene Info NP_001008701 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)