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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Stx2, syntaxin 2
Sequence ID:NM_007941
Entrez Gene ID:13852
Ensembl ID:ENSMUSG00000029428

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 G1.3|5 70.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:5: 128984566 - 129008501

 Exon Info From UCSC:
NM_007941

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6392250Full LengthBC046279syntaxin 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031967  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007941 NP_031967 Q00262 Syntaxin
SNARE

Related Sequences

 
mRNAGenPeptSwissProt
BC046279 AAH46279 Q80W45
D10475 BAA01278 Q00262
AK146462 BAE27190 Q80W45
AK165552 BAE38251 Q3TN38
AK167577 BAE39640 Q3TJ55

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Stx2 NP_031967 R.norvegicus Stx2 25130   NP_036880 97
H.sapiens STX2 2054 Gene Info NP_001971 85
A.thaliana SYP122 824405   NP_190808 27
A.thaliana SYP121 820355   NP_187788 25

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)