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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Coq2, coenzyme Q2 homolog, prenyltransferase (yeast)
Sequence ID:NM_027978
Entrez Gene ID:71883
Ensembl ID:ENSMUSG00000029319

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5|5 E3

Chromosomal Position (from UCSC)

Chromosomal Position:5: 100654725 - 100674256

NM_027978 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1746101083744101084489
747935101086836101087024
9361069101089190101089323
10701155101090855101090940
11561277101092598101092719
12781444101096910101097076
14451712101103007101103274

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30139077Full LengthBC080773coenzyme Q2 homolog, prenyltransferase (yeast)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_082254  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_027978 NP_082254 Q66JT7 EC 2.5.1.39 UbiA

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC080773 AAH80773 Q66JT7 EC 2.5.1.39
AK009092 BAB26064 Q66JT7 EC 2.5.1.39

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Coq2 NP_082254 R.norvegicus Coq2 498332   NP_001037720 90
H.sapiens COQ2 27235 Gene Info NP_056512 82
D.melanogaster Coq2 40988   NP_649789 64
A.gambiae AgaP_AGAP004513 1274658   XP_313812 62
A.thaliana PPT1 828466   NP_567688 59
C.elegans coq-2 175969   NP_498513 56
S.pombe coq2 2543235   NP_593219 47
S.cerevisiae COQ2 855778   NP_014439 46
N.crassa NCU01553 3872394   XP_956256 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)