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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Syncrip, synaptotagmin binding, cytoplasmic RNA interacting protein
Sequence ID:NM_019666
NM_019796
Entrez Gene ID:56403
Ensembl ID:ENSMUSG00000032423

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9|9 E3.2

Chromosomal Position (from UCSC)

Chromosomal Position:9: 88452693 - 88482196

 Exon Info From UCSC:
NM_019666
NM_019796

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4239809Full LengthBC108363synaptotagmin binding, cytoplasmic RNA interacting protein
4946652Full LengthBC041148synaptotagmin binding, cytoplasmic RNA interacting protein
5716184Full LengthBC080309synaptotagmin binding, cytoplasmic RNA interacting protein
30012104Full LengthBC050079synaptotagmin binding, cytoplasmic RNA interacting protein
3492542IncompleteBC004001synaptotagmin binding, cytoplasmic RNA interacting protein
3988029IncompleteBC055863synaptotagmin binding, cytoplasmic RNA interacting protein
6492951IncompleteBC058807synaptotagmin binding, cytoplasmic RNA interacting protein

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_062770  NP_062640  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_019666 NP_062640 Q7TMK9 RRM_1
NM_019796 NP_062770   RRM_1

Related Sequences

 
mRNAGenPeptSwissProt
AF093821 AAC62511 Q7TMK9
BC004001 AAH04001 Q7TMK9
BC041148 AAH41148 Q7TMK9
BC050079 AAH50079 Q7TMK9
BC055863 AAH55863 Q7TMK9
BC058807 AAH58807 Q7TMK9
BC080309 AAH80309 Q7TMK9
BC108363 AAI08364 Q7TMK9
AF408434 AAL11726 Q7TMK9
AB035725 BAA88342 Q7TMK9
AK034845 BAC28852 Q7TMK9
AK077588 BAC36880 Q7TMK9
AK078158 BAC37152 Q7TMK9
AK162448 BAE36923 Q3TRV3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Syncrip NP_062640 H.sapiens SYNCRIP 10492 Gene Info NP_006363 100
R.norvegicus Syncrip 363113   NP_001041381 100

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)