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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Letm1, leucine zipper-EF-hand containing transmembrane protein 1
Sequence ID:NM_019694
Entrez Gene ID:56384
Ensembl ID:ENSMUSG00000005299

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 B2|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 33742468 - 33782717

 Exon Info From UCSC:
NM_019694

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6533034Full LengthBC061115leucine zipper-EF-hand containing transmembrane protein 1
4917147IncompleteBC055865leucine zipper-EF-hand containing transmembrane protein 1
5352183IncompleteBC023862leucine zipper-EF-hand containing transmembrane protein 1
6395983IncompleteBC046326leucine zipper-EF-hand containing transmembrane protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_062668  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_019694 NP_062668 Q9Z2I0 LETM1

Related Sequences

 
mRNAGenPeptSwissProt
AF061026 AAD13139 Q9Z2I0
BC023862 AAH23862 Q9Z2I0
BC046326 AAH46326 Q9Z2I0
BC055865 AAH55865 Q9Z2I0
BC061115 AAH61115 Q9Z2I0
AB041582 BAB93544 Q9Z2I0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Letm1 NP_062668 R.norvegicus Letm1 305457   NP_001005884 95
H.sapiens LETM1 3954 Gene Info NP_036450 84
A.gambiae AgaP_AGAP003296 1279756   XP_319522 45
D.melanogaster Letm1 37912   NP_611922 44
C.elegans letm-1 179854   NP_506382 40
A.thaliana AT3G59820 825151   NP_191541 38
S.cerevisiae MDM38 854130   NP_014615 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)