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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Lcmt1, Leucine carboxyl methyltransferase 1
Sequence ID:NM_025304
Entrez Gene ID:30949
Ensembl ID:ENSMUSG00000030763

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 F3|7

Chromosomal Position (from UCSC)

Chromosomal Position:7: 123378055 - 123430346

 Exon Info From UCSC:
NM_025304

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40130784Full LengthBC132507leucine carboxyl methyltransferase 1
40130786Full LengthBC132509leucine carboxyl methyltransferase 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079580  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025304 NP_079580   LCM

Related Sequences

 
mRNAGenPeptSwissProt
BC010316 AAH10316 Q78K29
BC058379 AAH58379 Q6PDZ4
BC132507 AAI32508 A2RTH5
BC132509 AAI32510 A2RTH5
AK007326 BAB24961 Q9D963

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lcmt1 NP_079580 R.norvegicus Lcmt1 361643   NP_955437 97
H.sapiens LCMT1 51451 Gene Info NP_057393 89
D.melanogaster CG3793 34928   NP_609766 51
A.gambiae AgaP_AGAP008768 1275625   XP_314892 48
C.elegans B0285.4 175561   NP_497875 40
A.thaliana AT1G02100 837541   NP_973741 38
N.crassa NCU07993 3878802   XP_962663 35
S.pombe SPBP8B7.08c 2541346   NP_596515 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)