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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Nsf, N-ethylmaleimide sensitive fusion protein
Sequence ID:NM_008740
Entrez Gene ID:18195
Ensembl ID:ENSMUSG00000034187

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, retina, skin, soft tissue, spleen, stem cell, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11 E1|11 63.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 103821785 - 103872331

 Exon Info From UCSC:
NM_008740

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3968733Full LengthBC006627N-ethylmaleimide sensitive fusion protein
4506351Full LengthBC019167N-ethylmaleimide sensitive fusion protein

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032766  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_008740 NP_032766 P46460 EC 3.6.4.6 AAA
CDC48_N
CDC48_2

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U10120 AAA50498 P46460 EC 3.6.4.6
BC006627 AAH06627 P46460 EC 3.6.4.6
BC019167 AAH19167 P46460 EC 3.6.4.6
AK028415 BAC25937 P46460 EC 3.6.4.6
AK032120 BAC27713 P46460 EC 3.6.4.6
AK049281 BAC33656 P46460 EC 3.6.4.6
AK051430 BAC34637 P46460 EC 3.6.4.6
AK085086 BAC39361 P46460 EC 3.6.4.6
AK153905 BAE32247 P46460 EC 3.6.4.6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Nsf NP_032766 R.norvegicus Nsf 60355   NP_068516 100
H.sapiens NSF 4905 Gene Info NP_006169 98
A.gambiae AgaP_AGAP012684 1268587   XP_307148 65
D.melanogaster Nsf2 41694   NP_788676 64
D.melanogaster comt 47091   NP_524877 63
C.elegans nsf-1 266842   NP_001076603 56
S.pombe sec18 2542410   NP_594690 51
S.cerevisiae SEC18 852372   NP_009636 48
N.crassa NCU03387 3872981   XP_956834 48

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta