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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Chst10, carbohydrate sulfotransferase 10
Sequence ID:NM_145142
Entrez Gene ID:98388
Ensembl ID:ENSMUSG00000026080

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 B|1

Chromosomal Position (from UCSC)

Chromosomal Position:1: 38863875 - 38897992

NM_145142 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1721793892071738922879
218022853892482538924930
228625203892844538928679
252126123893079338930884
261327443894119438941325
274528643895278138952900
286531353895473438955004

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40130500Full LengthBC132223carbohydrate sulfotransferase 10
40130502Full LengthBC132225carbohydrate sulfotransferase 10
4018700IncompleteBC026960carbohydrate sulfotransferase 10

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_660124  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_145142 NP_660124   Sulfotransfer_2

Related Sequences

 
mRNAGenPeptSwissProt
BC026960 AAH26960 Q6PGK7
BC132223 AAI32224 A2RSS2
BC132225 AAI32226 A2RSS2
AF360543 AAK52908 Q6PGK7
AK046415 BAC32718 Q6PGK7
AK047378 BAC33040 Q6PGK7
AK050676 BAC34375 Q6PGK7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Chst10 NP_660124 R.norvegicus Chst10 140568   NP_536322 98
H.sapiens CHST10 9486 Gene Info NP_004845 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)