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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ctns, cystinosis, nephropathic
Sequence ID:NM_031251
Entrez Gene ID:83429
Ensembl ID:ENSMUSG00000005949

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 B4|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 73183601 - 73196717

 Exon Info From UCSC:
NM_031251

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3484952Full LengthBC005479cystinosis, nephropathic

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_112541  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_031251 NP_112541 P57757 PQ-loop

Related Sequences

 
mRNAGenPeptSwissProt
BC005479 AAH05479 P57757
AK054467 BAC35789 Q542U5
P57757
AK078511 BAC37316 P57757
AK079295 BAC37598 Q542U5
P57757
AK137143 BAE23249 Q542U5
P57757
AK170790 BAE42030 Q542U5
P57757
AK170828 BAE42058 Q3TC99
AJ250670 CAC19455 P57757

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ctns NP_112541 R.norvegicus Ctns 287478   XP_220649 94
H.sapiens CTNS 1497 Gene Info NP_001026851 84
D.melanogaster CG17119 42723   NP_651116 50
A.thaliana AT5G40670 834067   NP_198883 44
C.elegans ctns-1 174308   NP_872022 42
N.crassa NCU01250 3876801   XP_960653 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)