Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Atmin, ATM interactor
Sequence ID:NM_177700
Entrez Gene ID:234776
Ensembl ID:ENSMUSG00000047388

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8 E1|8

Chromosomal Position (from UCSC)

Chromosomal Position:8: 116956258 - 116958313

NM_177700 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1358119467292119467649
359484119476773119476898
485684119478613119478812
6854876119480152119484343

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6847850Full LengthBC060631ATM interactor
5030140IncompleteBC027752ATM interactor
6821677IncompleteBC058974cDNA sequence BC060631

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_808368  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_177700 NP_808368 Q6P9S1 zf-C2H2

Related Sequences

 
mRNAGenPeptSwissProt
BC027752 AAH27752 Q6P9S1
BC060631 AAH60631 Q6P9S1
AK087334 BAC39849 Q6P9S1
AK122281 BAC65563 Q6P9S1
AX775769 CAE11584  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Atmin NP_808368 R.norvegicus Atmin 315037   XP_235378 92
H.sapiens ATMIN 23300 Gene Info NP_056066 80

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)