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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cdk7, cyclin-dependent kinase 7
Sequence ID:NM_009874
Entrez Gene ID:12572
Ensembl ID:ENSMUSG00000069089

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:13 D1|13 55.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:13: 100708297 - 100730929

 Exon Info From UCSC:
NM_009874

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3585145Full LengthBC004605cyclin-dependent kinase 7 (homolog of Xenopus MO15 cdk-activating kinase)
9055655Full LengthBC141043cyclin-dependent kinase 7 (homolog of Xenopus MO15 cdk-activating kinase)
30358255Full LengthBC068160cyclin-dependent kinase 7 (homolog of Xenopus MO15 cdk-activating kinase)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034004  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_009874 NP_034004 Q03147 EC 2.7.11.23
EC 2.7.11.22
Pkinase
Pkinase_Tyr

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U11822 AAA64831 Q03147
Q3THG5
EC 2.7.11.23
EC 2.7.11.22
BC004605 AAH04605 Q03147 EC 2.7.11.23
EC 2.7.11.22
BC068160 AAH68160 Q03147
Q3THG5
EC 2.7.11.23
EC 2.7.11.22
BC141043 AAI41044 Q3THG5  
AK039084 BAC30233 Q8CAC4  
AK145759 BAE26631 Q03147
Q3THG5
EC 2.7.11.23
EC 2.7.11.22
AK146316 BAE27071 Q3UJT4  
AK168286 BAE40231 Q03147
Q3THG5
EC 2.7.11.23
EC 2.7.11.22
X57239 CAA40515 Q03147 EC 2.7.11.23
EC 2.7.11.22
X65070 CAA46203 Q03147 EC 2.7.11.23
EC 2.7.11.22
X74145 CAA52242 Q03147 EC 2.7.11.23
EC 2.7.11.22

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cdk7 NP_034004 R.norvegicus Cdk7 171150   XP_215467 98
H.sapiens CDK7 1022 Gene Info NP_001790 95
D.melanogaster Cdk7 31441   NP_511044 68
A.gambiae AgaP_AGAP002646 1273315   XP_312281 67
C.elegans cdk-7 171784   NP_490952 60
A.thaliana CAK4 842993   NP_176847 57
S.pombe mcs6 2540471   NP_596349 53
S.cerevisiae KIN28 851450   NP_010175 49
N.crassa NCU03659 3876890   XP_960739 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta