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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Stra13, stimulated by retinoic acid 13
Sequence ID:NM_016665
Entrez Gene ID:20892
Ensembl ID:ENSMUSG00000025144

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 E2|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 120710943 - 120713738

NM_016665 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
20385120572254120572619
386474120572703120572791
475528120573016120573069
529580120573157120573208
581655120575006120575080

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100062084Full LengthBC156610stimulated by retinoic acid 13
30047560IncompleteBC052335stimulated by retinoic acid 13

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_016665 NP_057874 Q8C4X1  

Related Sequences

 
mRNAGenPeptSwissProt
U95003 AAB53635 Q8C4X1
U95004 AAB53636 Q8C4X1
U95005 AAB53637 Q8C4X1
BC156610 AAI56611 Q8C4X1
AK076181 BAC36237 Q8C4X1
AK080500 BAC37933 Q8C4X1
AK170126 BAE41581 Q8C4X1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Stra13 NP_057874 H.sapiens STRA13 201254 Gene Info NP_659435 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)