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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Mm. Usp42, Ubiquitin specific peptidase 42
Sequence ID:NM_029749
Entrez Gene ID:76800
Ensembl ID:ENSMUSG00000051306

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:5 G2|5 82.0

Chromosomal Position (from UCSC)

Chromosomal Position:5: 143717316 - 143727954

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8860871Full LengthBC137852ubiquitin specific peptidase 42

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_084025  

Protein Infomation

NM_029749 NP_084025 B2RQC2 EC UCH

Related Sequences

BC137852 AAI37853 B2RQC2 EC
AY336567 AAR01977 Q0VJ56  
AK029419 BAC26442 Q8C0Z2  
AK041514 BAC30968 Q8BY93  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Usp42 NP_084025 R.norvegicus Usp42 288482   NP_001099379 92
H.sapiens USP42 84132 Gene Info NP_115548 71
A.thaliana UBP18 829295   NP_194895 42
A.thaliana UBP19 817000   NP_565576 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)