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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Rarb, retinoic acid receptor, beta
Sequence ID:NM_011243
Entrez Gene ID:218772
Ensembl ID:ENSMUSG00000017491

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:14 1.5 cM|14 A1-A3

Chromosomal Position (from UCSC)

Chromosomal Position:14: 16431335 - 16575188

NM_011243 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1614431726335317264780
144416021726667817266836
160318071726756717267771
180819841726924717269423
198521451727619117276351
214622871734144717341588
228824361738092717381075
243727891740737117407723

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30608242Full LengthBC076597retinoic acid receptor, beta

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035373  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011243 NP_035373 Q6DFX0 Hormone_recep
zf-C4

Related Sequences

 
mRNAGenPeptSwissProt
S56660 AAB25784 P22605
BC076597 AAH76597 Q6DFX0
S92180 AAN86725  
X56569 CAA39918 P22605
X56573 CAA39920 P22605
X56574 CAA39921 Q8K1P6
P22605

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Rarb NP_035373 H.sapiens RARB 5915 Gene Info NP_000956 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta