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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Abat, 4-aminobutyrate aminotransferase
Sequence ID:NM_001170978
NM_172961
Entrez Gene ID:268860
Ensembl ID:ENSMUSG00000057880

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16|16 A3

Chromosomal Position (from UCSC)

Chromosomal Position:16: 8513484 - 8619570

 Exon Info From UCSC:
NM_001170978
NM_172961

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6825487Full LengthBC0585214-aminobutyrate aminotransferase
6826741Full LengthBC0580794-aminobutyrate aminotransferase
4207253IncompleteBC0122234-aminobutyrate aminotransferase
5053096IncompleteBC0244094-aminobutyrate aminotransferase
30532686IncompleteBC0823294-aminobutyrate aminotransferase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_766549  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001170978 NP_001164449      
NM_172961 NP_766549 P61922 EC 2.6.1.19
EC 2.6.1.22
Aminotran_3

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC058079 AAH58079 P61922 EC 2.6.1.19
EC 2.6.1.22
BC058521 AAH58521 P61922 EC 2.6.1.19
EC 2.6.1.22
AK036128 BAC29312 P61922 EC 2.6.1.19
EC 2.6.1.22
AK132282 BAE21080 Q3V1S0  
AK156736 BAE33830 Q3U0M2  
AK160802 BAE36023 Q3TUE8  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Abat NP_766549 R.norvegicus Abat 81632   NP_112265 97
H.sapiens ABAT 18 Gene Info NP_000654 91
A.gambiae AgaP_AGAP006966 1270119   XP_001688095 57
D.melanogaster CG7433 40188   NP_001163479 55
N.crassa NCU08998 3875148   XP_959026 50
C.elegans gta-1 177897   NP_501862 48
S.pombe uga1 2542494   NP_594905 46
S.cerevisiae UGA1 852902   NP_011533 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)