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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Mbd4, methyl-CpG binding domain protein 4
Sequence ID:NM_010774
Entrez Gene ID:17193
Ensembl ID:ENSMUSG00000030322

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 E3|6 50.3 cM

Chromosomal Position (from UCSC)

Chromosomal Position:6: 115842343 - 115853358

NM_010774 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11866115790714115792579
18671970115794080115794183
19712120115794587115794736
21212255115795331115795465
22562330115795560115795634
23313157115798923115799749
31583379115800635115800856
33803584115803154115803358

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5356016Full LengthBC024812methyl-CpG binding domain protein 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034904  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010774 NP_034904 Q9Z2D7 HhH-GPD
MBD

Related Sequences

 
mRNAGenPeptSwissProt
AF072249 AAC68878 Q9Z2D7
BC024812 AAH24812 Q9Z2D7
AK147782 BAE28134 Q3UGS3
AK148171 BAE28391 Q3UG18
AK161005 BAE36144 Q3TU27

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Mbd4 NP_034904 R.norvegicus Mbd4 680915   XP_001059437 79
H.sapiens MBD4 8930 Gene Info NP_003916 69

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)