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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Polr1b, polymerase (RNA) I polypeptide B
Sequence ID:NM_009086
Entrez Gene ID:20017
Ensembl ID:ENSMUSG00000027395

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 F3|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 129101026 - 129120768

 Exon Info From UCSC:
NM_009086

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30355130Full LengthBC060656polymerase (RNA) I polypeptide B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033112  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_009086 NP_033112 P70700 EC 2.7.7.6 RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
RNA_pol_Rpa2_4

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U58280 AAC52850 P70700 EC 2.7.7.6
BC060656 AAH60656 Q6P9Q2  
AK143501 BAE25401 P70700 EC 2.7.7.6
AK144616 BAE25971 P70700 EC 2.7.7.6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Polr1b NP_033112 R.norvegicus Polr1b 83582   NP_113961 95
H.sapiens POLR1B 84172 Gene Info NP_061887 90
S.pombe rpa2 2541280   NP_595819 52
N.crassa NCU08616 3880984   XP_964824 49
C.elegans F14B4.3 172752   NP_492476 47
S.cerevisiae RPA135 856119   NP_015335 46
A.gambiae AgaP_AGAP009539 1271371   XP_310152 46
D.melanogaster RpI135 33210   NP_476708 46
A.thaliana NRPA2 839872   NP_564341 46

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta