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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Actr2, ARP2 actin-related protein 2
Sequence ID:NM_146243
Entrez Gene ID:66713
Ensembl ID:ENSMUSG00000020152

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11 A3.1|11 31.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 20062305 - 20063435

NM_146243 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
2225751996230819964861
257627081997245819972590
270928541997719019977335
285530041998002519980174
300531411998066419980800
314232141999129719991369
321534301999423219994447
343135412000082520000935
354236882001280720012953

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5325176Full LengthBC027799ARP2 actin-related protein 2 homolog (yeast)
4976659IncompleteBC047530ARP2 actin-related protein 2 homolog (yeast)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_666355  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_146243 NP_666355 Q5SW83
P61161
Actin

Related Sequences

 
mRNAGenPeptSwissProt
BC027799 AAH27799 Q5SW83
P61161
BC047530 AAH47530 Q5SW83
P61161
AK032832 BAC28048 Q5SW83
P61161
AK033014 BAC28126 Q8BMA4
AK088216 BAC40216 Q5SW83
P61161
AK163217 BAE37239 Q5SW83
P61161

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Actr2 NP_666355 H.sapiens ACTR2 10097 Gene Info NP_001005386 100
R.norvegicus Actr2 289820   NP_001009268 100
D.melanogaster Arp14D 32623   NP_001097001 83
A.gambiae AgaP_AGAP000985 1270482   XP_309181 82
C.elegans arx-2 179440   NP_505657 76
N.crassa NCU07171 3873571   XP_957396 71
S.cerevisiae ARP2 851532   NP_010255 68
S.pombe SPAC22F8.01 3361469   NP_001018288 66
A.thaliana ARP2 822317   NP_189336 63

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)