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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Eef1d, eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
Sequence ID:NM_023240
NM_029663
Entrez Gene ID:66656
Ensembl ID:ENSMUSG00000055762

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:15|15 E1

Chromosomal Position (from UCSC)

Chromosomal Position:15: 75895491 - 75909306

 Exon Info From UCSC:
NM_023240
NM_029663

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6403006Full LengthBC079855eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_075729  NP_083939  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_023240 NP_075729 Q80T06 EF1_GNE
NM_029663 NP_083939   EF1_GNE

Related Sequences

 
mRNAGenPeptSwissProt
AF304351 AAG17466 P57776
BC013059 AAH13059 Q91VK2
BC079855 AAH79855 P57776
AK006403 BAB24571 Q9CVV2
AK010347 BAB26870 Q80T06
P57776
AK017616 BAB30841 P57776
AK044934 BAC32149 Q80T06
AK054335 BAC35736 Q8BW50

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Eef1d NP_083939 R.norvegicus Eef1d 300033   NP_001013122 95
H.sapiens EEF1D 1936 Gene Info NP_001123525 86
D.melanogaster eEF1delta 34363   NP_609361 56
C.elegans Y41E3.10 178419   NP_502816 54
A.gambiae AgaP_AGAP004235 1274080   XP_313149 49

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)