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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Arfgap3, ADP-ribosylation factor GTPase activating protein 3
Sequence ID:NM_025445
Entrez Gene ID:66251
Ensembl ID:ENSMUSG00000054277

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:15|15 E3

Chromosomal Position (from UCSC)

Chromosomal Position:15: 83299739 - 83305341

 Exon Info From UCSC:
NM_025445

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3592719Full LengthBC004081ADP-ribosylation factor GTPase activating protein 3
6310619Full LengthBC060369ADP-ribosylation factor GTPase activating protein 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079721  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025445 NP_079721   ArfGap

Related Sequences

 
mRNAGenPeptSwissProt
BC004081 AAH04081 Q9D8S3
BC060369 AAH60369 Q9D8S3
AK007732 BAB25220 Q9D8S3
AK028990 BAC26229 Q9D8S3
AK075788 BAC35959 Q9D8S3
AK169107 BAE40889 Q9D8S3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Arfgap3 NP_079721 H.sapiens ARFGAP3 26286 Gene Info NP_055385 81
A.thaliana AGD9 834718   NP_199487 47
A.thaliana AGD8 827512   NP_567543 45
N.crassa NCU08811 3878146   XP_961998 39
S.pombe glo3 2541825   NP_594843 31
S.cerevisiae GLO3 856859   NP_011048 30

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta