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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Hoxb9, homeobox B9
Sequence ID:NM_008270
Entrez Gene ID:15417
Ensembl ID:ENSMUSG00000020875

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 D|11 56.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 96271522 - 96275376

NM_008270 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
17299613264396133371
73026999613593796137906

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40045678Full LengthBC100743homeo box B9
40045679Full LengthBC103573homeo box B9

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032296  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008270 NP_032296 P20615 Homeobox
Hox9_act

Related Sequences

 
mRNAGenPeptSwissProt
M34857 AAA37847 P20615
S66855 AAB28828 P20615
BC100742 AAI00743 Q496Q7
BC100743 AAI00744 Q496Q8
BC100744 AAI00745 Q496Q7
BC103573 AAI03574 Q496Q8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hoxb9 NP_032296 R.norvegicus Hoxb9 287647   NP_001093967 100
H.sapiens HOXB9 3219 Gene Info NP_076922 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta