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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Mm. Slc52a3, solute carrier protein family 52, member 3
Sequence ID:NM_001164819
Entrez Gene ID:69698
Ensembl ID:ENSMUSG00000027463

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:2|2 H1

Chromosomal Position (from UCSC)

Chromosomal Position:2: 151996627 - 152009256

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4910227Full LengthBC016127RIKEN cDNA 2310046K01 gene

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_081448  

Protein Infomation

NM_001164819 NP_001158291    
NM_001164820 NP_001158292    
NM_027172 NP_081448 Q9D6X5 DUF1011

Related Sequences

BC016127 AAH16127 Q9D6X5
AK009850 BAB26542 Q9D6X5
AK029091 BAC26290 Q9D6X5
AK154970 BAE32962 Q9D6X5
AK170158 BAE41605 Q9D6X5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Slc52a3 NP_001158291 R.norvegicus RGD1304644 311536   NP_001032275 95
H.sapiens SLC52A3 113278 Gene Info NP_212134 76
D.melanogaster CG11576 43756   NP_651901 41
A.gambiae AgaP_AGAP000181 1272083   XP_310954 40
C.elegans Y47D7A.14 178842   NP_504227 39
C.elegans Y47D7A.16 3896860   NP_001033515 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)