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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Nupl1, nucleoporin like 1
Sequence ID:NM_170591
Entrez Gene ID:71844
Ensembl ID:ENSMUSG00000063895

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, testis, thymus, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:14 D1|14

Chromosomal Position (from UCSC)

Chromosomal Position:14: 60205613 - 60251479

 Exon Info From UCSC:
NM_170591

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3964978Full LengthBC026743nucleoporin like 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_170591 NP_733479 Q8R332  

Related Sequences

 
mRNAGenPeptSwissProt
BC026743 AAH26743 Q8R332
AK029688 BAC26564 Q8R332
AK078279 BAC37200 Q8R332
AK086412 BAC39663 Q8R332
AK129134 BAC97944 Q6ZQC2
AK133721 BAE21799 Q3UZQ6
AK146477 BAE27201 Q8R332

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Nupl1 NP_733479 R.norvegicus Nupl1 245922   NP_620791 97
H.sapiens NUPL1 9818 Gene Info NP_054808 93
A.gambiae AgaP_AGAP008772 1275631   XP_314898 39
D.melanogaster Nup58 42342   NP_650821 33

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)