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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ldb2, LIM domain binding 2
Sequence ID:NM_001077398
NM_010698
Entrez Gene ID:16826
Ensembl ID:ENSMUSG00000039706

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 B3|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 44473283 - 44799493

 Exon Info From UCSC:
NM_001077398
NM_010698

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30360903Full LengthBC079611LIM domain binding 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034828  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001077398 NP_001070866    
NM_010698 NP_034828 O55203 LIM_bind

Related Sequences

 
mRNAGenPeptSwissProt
U89487 AAB96884 O55203
U89489 AAB96886 O55203
BC079611 AAH79611 O55203
AK146860 BAE27488 O55203
AK147160 BAE27725 O55203

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ldb2 NP_034828 R.norvegicus Ldb2 289664   NP_001099479 99
H.sapiens LDB2 9079 Gene Info NP_001281 98
A.gambiae AgaP_AGAP004691 1278566   XP_318175 75
D.melanogaster Chi 37837   NP_726403 65

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)