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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Atp11a, ATPase, class VI, type 11A
Sequence ID:NM_015804
Entrez Gene ID:50770
Ensembl ID:ENSMUSG00000031441

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, kidney, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:8|8 A2

Chromosomal Position (from UCSC)

Chromosomal Position:8: 12757223 - 12865173

 Exon Info From UCSC:
NM_015804

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861737Full LengthBC138715ATPase, class VI, type 11A
1225714IncompleteBC027660ATPase, class VI, type 11A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_056619  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_015804 NP_056619 P98197 EC 3.6.3.1 Hydrolase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF156551 AAF09449 P98197 EC 3.6.3.1
BC138715 AAI38716 P98197 EC 3.6.3.1
AK028779 BAC26116 Q8BGE2  
AK078972 BAC37488 Q8BGE2  
AK173088 BAD32366 Q69ZT0  
AK161916 BAE36632 Q8BGE2  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Atp11a NP_056619 R.norvegicus Atp11a 306600   NP_001100794 98
H.sapiens ATP11A 23250 Gene Info NP_115565 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)