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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Lrrcc1, leucine rich repeat and coiled-coil domain containing 1
Sequence ID:NM_001163579
NM_001163580
NM_028915
Entrez Gene ID:71710
Ensembl ID:ENSMUSG00000027550

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3|3 A2

Chromosomal Position (from UCSC)

Chromosomal Position:3: 14533787 - 14572643

 Exon Info From UCSC:
NM_001163579
NM_001163580
NM_028915

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861756Full LengthBC138734leucine rich repeat and coiled-coil domain containing 1
8861757Full LengthBC138735leucine rich repeat and coiled-coil domain containing 1
30248071IncompleteBC061202leucine rich repeat and coiled-coil domain containing 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_083191  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001163579 NP_001157051    
NM_001163580 NP_001157052    
NM_028915 NP_083191   LRR_1

Related Sequences

 
mRNAGenPeptSwissProt
BC061202 AAH61202 Q69ZB0
BC099680 AAH99680 Q69ZB0
BC138734 AAI38735 Q69ZB0
BC138735 AAI38736 B9EI20
AK004646 BAB23437 Q69ZB0
AK016559 BAB30303 Q69ZB0
AK173256 BAD32534 Q69ZB0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lrrcc1 NP_001157051 R.norvegicus Lrrcc1 266808   XP_342210 92
H.sapiens LRRCC1 85444 Gene Info NP_208325 80

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)