Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cabin1, calcineurin binding protein 1
Sequence ID:NM_172549
Entrez Gene ID:104248
Ensembl ID:ENSMUSG00000020196

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:10 C1|10 40.7 cM

Chromosomal Position (from UCSC)

Chromosomal Position:10: 75646118 - 75700377

 Exon Info From UCSC:
NM_172549

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9087736Full LengthBC150825calcineurin binding protein 1
3662342IncompleteBC039933calcineurin binding protein 1
5038220IncompleteBC056651calcineurin binding protein 1
6431465IncompleteBC051668calcineurin binding protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_766137  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_172549 NP_766137   TPR_1
TPR_2

Related Sequences

 
mRNAGenPeptSwissProt
BC039933 AAH39933 Q8CGG3
BC051668 AAH51668 Q80X22
BC056651 AAH56651 Q6PH97
BC057551 AAH57551 Q6PFH4
BC150825 AAI50826 B9EKC5
AK078480 BAC37299 Q8BIF4
AK168811 BAE40638 Q3TGB0
AK169961 BAE41484 Q3TDW4
AK170921 BAE42114 Q3TC43

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cabin1 NP_766137 R.norvegicus Cabin1 94165   NP_446027 95
H.sapiens CABIN1 23523 Gene Info NP_001186210 90

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta