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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. C1qb, complement component 1, q subcomponent, beta polypeptide
Sequence ID:NM_009777
Entrez Gene ID:12260
Ensembl ID:ENSMUSG00000036905

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 D3|4 66.1 cM

Chromosomal Position (from UCSC)

Chromosomal Position:4: 136880132 - 136886133

NM_009777 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
2725136436060136436783
726927136438041136438242
9281062136441957136442091

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5715633Full LengthBC067001complement component 1, q subcomponent, beta polypeptide

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033907  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009777 NP_033907 P14106 C1q
Collagen

Related Sequences

 
mRNAGenPeptSwissProt
M36293 AAA37283 P14106
M22531 AAA37335 P14106
BC067001 AAH67001 P14106
AK140712 BAE24452 Q3US82
AK152764 BAE31477 P14106
AK153124 BAE31739 Q3U6I5
X16874 CAA34757 P14106

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus C1qb NP_033907 R.norvegicus C1qb 29687   NP_062135 89
H.sapiens C1QB 713 Gene Info NP_000482 80

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta