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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Dynll1, dynein light chain LC8-type 1
Sequence ID:NM_019682
Entrez Gene ID:56455
Ensembl ID:ENSMUSG00000009013

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5 F|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 115298533 - 115300924

NM_019682 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
171740115747118115748841
17411878115750521115750658
18792037115750840115750998

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3158148Full LengthBC008106dynein light chain LC8-type 1
3158148Full LengthBC034258dynein light chain LC8-type 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_062656  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_019682 NP_062656 Q9D6F6 Dynein_light

Related Sequences

 
mRNAGenPeptSwissProt
AF020185 AAD01643 P63168
BC008106 AAH08106 P63168
BC034258 AAH34258 P63168
AK002522 BAB22160 P63168
AK010614 BAB27063 P63168
AK010685 BAB27117 P63168
AK013721 BAB28970 P63168
AK013725 BAB28973 Q9D6F6
AK082923 BAC38691 P63168
AK147977 BAE28262 P63168

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Dynll1 NP_062656 H.sapiens DYNLL1 8655 Gene Info NP_003737 100
R.norvegicus Dynll1 58945   NP_445771 100
D.melanogaster Cdlc2 33319   NP_477408 94
D.melanogaster ctp 31405   NP_525075 94
A.gambiae AgaP_AGAP001335 1281844   XP_321810 93
P.falciparum PFL0660w 811185   XP_001350541 82
S.pombe dlc2 2543530   NP_594368 75
A.thaliana AT4G15930 827275   NP_193328 70

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta