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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Nfkb1, nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105
Sequence ID:NM_008689
Entrez Gene ID:18033
Ensembl ID:ENSMUSG00000028163

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, placenta, pooled tissue, retina, salivary gland, skin, soft tissue, spleen, stem cell, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3 G3|3 68.9 cM

Chromosomal Position (from UCSC)

Chromosomal Position:3: 135585338 - 135667785

 Exon Info From UCSC:
NM_008689

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861555Full LengthBC138535nuclear factor of kappa light polypeptide gene enhancer in B-cells 1, p105
8861556Full LengthBC138536nuclear factor of kappa light polypeptide gene enhancer in B-cells 1, p105

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032715  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008689 NP_032715 P25799 Ank
Death
RHD
TIG

Related Sequences

 
mRNAGenPeptSwissProt
M57999 AAA40415 P25799
S89033 AAB21851 P25799
S66656 AAB28573 P25799
L13466 AAC37644 Q61723
BC050841 AAH50841 P25799
BC138535 AAI38536 P25799
BC138536 AAI38537 P25799
AY423849 AAR00341 P25799
AY521462 AAS00547 P25799
AY521463 AAS00548 P25799
AK052726 BAC35117 P25799
AB119195 BAC84979 P25799
AK157915 BAE34261 P25799
AK089660 BAE43399 P25799

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Nfkb1 NP_032715 R.norvegicus Nfkb1 81736   XP_342347 95
H.sapiens NFKB1 4790 Gene Info NP_003989 88
A.gambiae REL2 1270310   XP_308995 33
D.melanogaster Rel 41087   NP_477094 33

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta