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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Sytl1, synaptotagmin-like 1
Sequence ID:NM_031393
Entrez Gene ID:269589
Ensembl ID:ENSMUSG00000028860

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 D2.3|4

Chromosomal Position (from UCSC)

Chromosomal Position:4: 133253166 - 133263066

 Exon Info From UCSC:
NM_031393

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3155535Full LengthBC005623synaptotagmin-like 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_113570  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_031393 NP_113570   C2

Related Sequences

 
mRNAGenPeptSwissProt
BC005623 AAH05623 Q99N80
AB050741 BAB32651 Q99N80
AK131162 BAD21412 Q6KAP5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Sytl1 NP_113570 R.norvegicus Sytl1 297872   NP_001020822 93
H.sapiens SYTL1 84958 Gene Info NP_001180237 83

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)