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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Fgd4, FYVE, RhoGEF and PH domain containing 4
Sequence ID:NM_139232
NM_139233
NM_139234
Entrez Gene ID:224014
Ensembl ID:ENSMUSG00000022788

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16 A3|16

Chromosomal Position (from UCSC)

Chromosomal Position:16: 16421977 - 16560149

 Exon Info From UCSC:
NM_139232
NM_139233
NM_139234

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40111637Full LengthBC129902FYVE, RhoGEF and PH domain containing 4
40111639Full LengthBC129903FYVE, RhoGEF and PH domain containing 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_631980  NP_631979  NP_631978  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_139232 NP_631978 Q91ZT5 PH
RhoGEF
FYVE
NM_139233 NP_631979   PH
RhoGEF
FYVE
NM_139234 NP_631980   PH
RhoGEF

Related Sequences

 
mRNAGenPeptSwissProt
BC129902 AAI29903 Q91ZT5
BC129903 AAI29904 Q91ZT5
AF402611 AAL05631 Q91ZT5
AF402612 AAL05632 Q91ZT5
AF402613 AAL05633 Q91ZT5
AK030390 BAC26939 Q8BMP1
AK034504 BAC28733 Q91ZT5
AK054242 BAC35703 Q91ZT5
AK134961 BAE22357 Q3UY56
AK149626 BAE28995 Q91ZT5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Fgd4 NP_631978 R.norvegicus Fgd4 246174   NP_640356 93
H.sapiens FGD4 121512 Gene Info NP_640334 84

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)