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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Ctr9, Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
Sequence ID:NM_009431
Entrez Gene ID:22083
Ensembl ID:ENSMUSG00000005609

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 F1|7 54.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:7: 111049266 - 111056374

 Exon Info From UCSC:
NM_009431

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3603635IncompleteBC010344Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
5062578IncompleteBC080719Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
5364021IncompleteBC024749Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
5702300IncompleteBC060091SH2 domain binding protein 1 (tetratricopeptide repeat containing)
30058591IncompleteBC053910Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033457  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009431 NP_033457 Q62018 TPR_1
TPR_2

Related Sequences

 
mRNAGenPeptSwissProt
L49502 AAC42083 Q62018
BC010344 AAH10344 Q05DK2
BC024749 AAH24749 Q05CJ7
BC053910 AAH53910 Q62018
BC071247 AAH71247 Q6IQZ4
BC080719 AAH80719 Q62018
AK040205 BAC30540 Q62018
AK040331 BAC30566 Q62018
AK045101 BAC32223 Q62018
AK083921 BAC39065 Q62018
AB093211 BAC41395 Q62018
AK134990 BAE22373 Q62018
AK148536 BAE28606 Q62018

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ctr9 NP_033457 R.norvegicus Ctr9 293184   XP_238127 99
H.sapiens CTR9 9646 Gene Info NP_055448 98
A.gambiae AgaP_AGAP001559 1281609   XP_321554 63
D.melanogaster CG2469 38149   NP_788449 60
C.elegans B0464.2 176335   NP_499090 43
N.crassa NCU00095 3873382   XP_957219 30
S.pombe tpr1 2542077   NP_594620 29
S.cerevisiae CTR9 854020   NP_014496 28
A.thaliana ELF8 815177   NP_178674 13

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)