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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Mrps18c, mitochondrial ribosomal protein S18C
Sequence ID:NM_026826
Entrez Gene ID:68735
Ensembl ID:ENSMUSG00000016833

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5|5 E3

Chromosomal Position (from UCSC)

Chromosomal Position:5: 100798746 - 100804454

NM_026826 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1102101227777101227878
103164101228570101228631
165248101230926101231009
249306101232071101232128
307366101232988101233047
367502101233350101233485

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
1196057Full LengthBC028442mitochondrial ribosomal protein S18C

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_081102  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_026826 NP_081102 Q8R2L5 Ribosomal_S18

Related Sequences

 
mRNAGenPeptSwissProt
BC028442 AAH28442 Q8R2L5
AK004139 BAB23188 Q8R2L5
AK088290 BAC40261 Q8BTZ9
AK145935 BAE26766 Q8R2L5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Mrps18c NP_081102 R.norvegicus Mrps18c 289469   NP_001099466 91
H.sapiens MRPS18C 51023 Gene Info NP_057151 82
D.melanogaster mRpS18C 43609   NP_524593 51
C.elegans T14B4.2 188492   NP_495374 48
A.gambiae AgaP_AGAP008773 1275632   XP_314899 45

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)